Lab Techniques for Diagnosing Microbial Infections
Chapter 3 Outbreak of plasmid?mediated NDM?1?producing Klebsiella pneumoniae ST105 among neonatal patients in Yunnan, China................................................................................15 Rui Zheng, Qian Zhang, Yidan Guo, Yue Feng, Li Liu, Amei Zhang, Yue Zhao, Xiaoyu Yang and Xueshan Xia Chapter 4 Characterization of clinical extensively drug?resistant Pseudomonas aeruginosa in the Hunan province of China............................................................................................23 Jun Li, Mingxiang Zou, Qingya Dou, Yongmei Hu, Haichen Wang, Qun Yan and Wen’ en Liu Chapter 5 Performance evaluation of a rapid whole?blood immunoassay for the detection of IgG antibodies against Helicobacter pylori in daily clinical practice..............................................................................................................................................30 Dietmar Enko, Gabriele Halwachs?Baumann, Robert Stolba, Ortrun Rössler and Gernot Kriegshäuser Chapter 6 Characteristics of multidrug?resistant Acinetobacter baumannii strains isolated in Geneva during colonization or infection.............................................................................35 Abdessalam Cherkaoui, Stéphane Emonet, Gesuele Renzi and Jacques Schrenzel Chapter 7 Detection of a CTX?M group 2 beta?lactamase gene in a Klebsiella pneumonia isolate from a tertiary care hospital, Trinidad and Tob................................42 Paul Cheddie, Francis Dziva and Patrick Eberechi Akpaka Chapter 8 Phenotypic and genetic changes in the life cycle of small colony variants of Salmonella enterica serotype Typhimurium induced by streptomycin.........................................49 Wanli Li, Yinghui Li, Yarong Wu, Yujun Cui, Yao Liu, Xiaolu Shi, Qian Zhang, Qiongcheng Chen, Qun Sun and Qinghua Hu Chapter 9 Determinants of felt demand for dengue vaccines in the North Caribbean region of Colombia.......................................................................................................................................59 Yalil T. Bracho?Churio, Ruth A. Martínez?Vega, Alfonso J. Rodriguez?Morales, Ronald G. Díaz?Quijano, María L. Luna?González and Fredi A. Diaz?Quijano Chapter 10 Genetic characterization of TEM?type ESBL?associated antibacterial resistance in Enterobacteriaceae in a tertiary hospital in Ghana.........................................................68 Daniel Oduro?Mensah, Noah Obeng?Nkrumah, Evelyn Yayra Bonney, Ebenezer Oduro?Mensah, Kingsley Twum?Danso, Yaa Difie Osei and Sammy Tawiah Sackey Chapter 11 Phenotypic and molecular characterization of clinical isolates of Acinetobacter baumannii isolated from Delhi, India.............................................................................77 Dabet Rynga, Malini Shariff and Monorama Deb Chapter 12 Molecular characterization of clinical IMP?producing Klebsiella pneumoniae isolates from a Chinese Tertiary Hospital .....................................................85 Kaisheng Lai, Yanning Ma, Ling Guo, Jingna An, Liyan Ye and Jiyong Yang Chapter 13 Occurrence of co?existing blaVIM?2 and blaNDM?1 in clinical isolates of Pseudomonas aeruginosa from India........................................................................................................90 Deepjyoti Paul, Debadatta Dhar, Anand Prakash Maurya, Shweta Mishra, Gauri Dutt Sharma, Atanu Chakravarty and Amitabha Bhattacharjee Chapter 14 The potential of bacteriophage cocktail in eliminating Methicillin?resistant Staphylococcus aureus biofilms in terms of different extracellular matrices expressed by PIA, ciaA?D and FnBPA genes...........................................................................................96 Ahmed Sahib Abdulamir, Sabah A. A. Jassim, Rand R. Hafidh and Fatimah Abu Bakar Chapter 15 The occurrence of ESBL?producing Escherichia coli carrying aminoglycoside resistance genes in urinary tract infections in Saudi Arabia...............................106 Essam J. Alyamani, Anamil M. Khiyami, Rayan Y. Booq, Majed A. Majrashi, Fayez S. Bahwerth and Elena Rechkina Chapter 16 The evaluation and application of multilocus variable number tandem repeat analysis (MLVA) for the molecular epidemiological study of Salmonella enterica subsp. enterica serovar Enteritidis infection.....................................................118 Yao Liu, Xiaolu Shi, Yinghui Li, Qiongcheng Chen, Min Jiang, Wanli Li, Yaqun Qiu, Yiman Lin, Yixiang Jiang, Biao Kan, Qun Sun and Qinghua Hu Chapter 17 Profiling of antibiotic resistance of bacterial species recovered from routine clinical isolates in Ethiopia.......................................................................................................................127 Robert?Jan ten Hove, Melaku Tesfaye, Witold Frederik ten Hove and Mesfin Nigussie Chapter 18 The draft genomes and investigation of serotype distribution, antimicrobial resistance of group B Streptococcus strains isolated from urine in Suzhou, China..............................................................................................................................135 Yong Guo, Xiao Deng, Yuan Liang, Liang Zhang, Guo?Ping Zhao and Yan Zhou Contents Contents Chapter 19 Extended spectrum beta?lactamase and metallo beta?lactamase production among Escherichia coli and Klebsiella pneumoniae isolated from different clinical samples in a tertiary care hospital in Kathmandu, Nepal....................................................142 Krishus Nepal, Narayan Dutt Pant, Bibhusan Neupane, Ankit Belbase, Rikesh Baidhya, Ram Krishna Shrestha, Binod Lekhak, Dwij Raj Bhatta and Bharat Jha Chapter 20 The frequency of Klebsiella pneumonia encoding genes for CTX?M, TEM?1 and SHV?1 extended?spectrum beta lactamases enzymes isolated from urinary tract infection......................................................................................................................148 Masomeh Dehshiri, Seyed Sajjad Khoramrooz, Mohammad Zoladl, Seyed Abdolmajid Khosravani, Najmeh Parhizgari, Mohammad Hossein Motazedian, Soheyla Jahedi and Asghar Sharifi Chapter 21 Association of virulence gene expression with colistin?resistance in Acinetobacter baumannii: analysis of genotype, antimicrobial susceptibility, and biofilm formation.....................................................................................................155 Abbas Bahador, Zahra Farshadzadeh, Reza Raoofian, Masoumeh Mokhtaran, Babak Pourakbari, Maryam Pourhajibagher and Farhad B. Hashemi Chapter 22 Molecular determination of antimicrobial resistance in Escherichia coli isolated from raw meat in Addis Ababa and Bishoftu, Ethiopia......................................................166 Yohannes Equar Messele, Reta Duguma Abdi, Shimels Tikuye Yalew, Desiye Tesfaye Tegegne, Bezina Arega Emeru and Gebremeskel Mamu Werid Chapter 23 Impact of the use of local fidaxomicin treatment algorithms for managing Clostridium difficile infection in hospitalized patients in southeastern United States................................................................................................................................................175 Jonathan C. Cho, Sandy J. Estrada, Jamie J. Kisgen, Angelina Davis and Laura Puzniak Chapter 24 Prenatal and postnatal antibiotic exposure influences the gut microbiota of preterm infants in neonatal intensive care units..................................................................................181 Zhi?Hui Zou, Dong Liu, Hong?Dong Li, Dan?Ping Zhu, Yu He, Ting Hou and Jia?Lin Yu Chapter 25 Microbial virulence, molecular epidemiology and pathogenic factors of fluoroquinolone?resistant Haemophilus influenzae infections in Guangzhou, China......................................................................................................................................191 Dingqiang Chen, Shuxian Wen, Donghua Feng, Ruirui Xu, Junyan Liu, Brian M. Peters, Danhong Su, Yongping Lin, Ling Yang, Zhenbo Xu and Mark E. Shirtliff Chapter 26 Molecular characterization of ??lactamase genes in clinical isolates of carbapenem?resistant Acinetobacter baumannii..............................................................................200 Kevin M. Raible, Bhaswati Sen, Nancy Law, Tiffany E. Bias, Christopher L. Emery, Garth D. Ehrlich and Suresh G. Joshi Chapter 27 Second?line therapy for Helicobacter pylori eradication causing antibiotic?associated hemorrhagic colitis..............................................................................................209 Kazuyuki Tanaka, Mikihiro Fujiya, Aki Sakatani, Shugo Fujibayashi, Yoshiki Nomura, Nobuhiro Ueno, Shin Kashima, Takuma Goto, Junpei Sasajima, Kentaro Moriichi and Toshikatsu Okumura Chapter 28 Detection of bacterial DNA from central venous catheter removed from patients by next generation sequencing.................................................................................................213 Ken?ichi Okuda, Yutaka Yoshii, Satomi Yamada, Akio Chiba, Ippei Hironaka, Seiji Hori, Katsuhiko Yanaga and Yoshimitsu Mizunoe Permissions List of Contributors Index